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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924789.1_cds_XP_016473086.1_65253
CDS Infomation

[gene=LOC107795035] [db_xref=GeneID:107795035] [protein=E3 ubiquitin-protein ligase SDIR1-like isoform X2] [protein_id=XP_016473086.1] [location=complement(join(46299..46424,46725..46841,47296..47344,48696..48810,48966..49194,49309..49361,49455..49497))] [gbkey=CDS]
Sequence

ATGAGTCCAACAAAAACGGCCTGCGTCGTTCTGTCTATCTTAGTTCTTTTCCTATACACT
TTAAGGCCCGCTGATGACACGTCTATGGTCTTCATGGGCTGCGTTTTTGTGCATGTAAGC
ATTATTATGGCATTTGTTATGATATATGAAATTTGTTCTACACGTCGAGCTCGAGGCAGA
ACAAGTAGTACATCCGTTAACCGCTTGATTGGTTGTGATACACTCCATCACTATGTGCCT
TCATCAGAAGCTTTTCCAACCAGAAGAAGATTGCAGGAGCTGAGGCTCCAAGTTGCTCTT
CTAGATCGTGAACTTGTTGAGTTTGAAAACGTAACCTTAAGTGAGTTGCCTTCTGCTATT
GTTTTCGGAATTCCTTCCATGAATGAAGAAGAGATAAATGCCTTACCTGTTCACAATTAC
AAAGGCATTGGTCTAGAGAGTGAGGATGCACCACTGAAACAAGGCTCATTTTCTGCTGCC
TCAGCTAAGGGATATTGGAGGATAGGTATAACAGAGGATCCCTCATGTGACGAATCGACA
TGTAATATTTGTTTCCAGCAAGTTATAAAGGGAGACCTTGTTCGTAGCTTGCCATGTTTA
CATCAGTTTCATAGGAGATGCATTAACCCGTGGCTCGCAGTGAATGCTTCATGTCCAATC
TGTAAATTTATGCTGGGGTCAGGAGCGCAGCAAAGCATCGAGAGTGTGATTAGTGATGAT
GAAATGGTCTGA

Peptide Sequence

PEP ID

XP_016473086.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SDIR1-like isoform X2 [Nicotiana tabacum]
Sequence

MSPTKTACVVLSILVLFLYTLRPADDTSMVFMGCVFVHVSIIMAFVMIYEICSTRRARGR
TSSTSVNRLIGCDTLHHYVPSSEAFPTRRRLQELRLQVALLDRELVEFENVTLSELPSAI
VFGIPSMNEEEINALPVHNYKGIGLESEDAPLKQGSFSAASAKGYWRIGITEDPSCDEST
CNICFQQVIKGDLVRSLPCLHQFHRRCINPWLAVNASCPICKFMLGSGAQQSIESVISDD
EMV

Transcript Sequence

Gene sequence data has not been registered.